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Shifting the limits in wheat research and breeding using a fully annotated reference genome

Authors
R. Appels,Arnaud Bellec
Nils Stein,Natasha Glover,Beat Keller,Françoise Alfama,Curtis Pozniak,Frédéric Choulet,Assaf Distelfeld,Jesse Poland,Gil Ronen,Hadi Quesneville,Omer Barad,Kobi Baruch,Martin Mascher,Gil Ben-Zvi,Etienne Paux,Hélène Rimbert,François Balfourier,Juan Gutiérrez-González,D Arnaud,ChuShin Koh,Pierre Sourdille,Raj Pasam,Zeev Frenkel,Philippe Rigault,Josquin Tibbits,Vijay Tiwari,M. Spannagl,Daniel Lang,Heidrun Gundlach,Georg Haberer,Klaus Mayer,Danara Ormanbekova,Verena Prade,Hana Šimková,Thomas Wicker,Manuel Corpas,Marius Felder,Nicolas Guilhot,Gemy Kaithakottil,Jens Keilwagen,Philippe Leroy,Thomas Lux,Sven Twardziok,Luca Venturini,Angéla Juhász,Michaël Abrouk,Iris Fischer,Cristóbal Uauy,Philippa Borrill,Ricardo Ramírez-González,Smahane Chalabi,Boulos Chalhoub,Aron Cory,Raju Datla,Mark Davey,John Jacobs,Stephen Robinson,Burkhard Steuernagel,Fred Ex,Brande Wulff,Thomas Blein,Abdelhafid Bendahmane,Lorenzo Concia,David Latrasse,Jan Bartoš,Bikram Gill,Abraham Korol,Jane Rogers,Odd-Arne Olsen,Kuldeep Singh,Mario Cáccamo,Edwin Vossen,Sonia Vautrin,Xiaojun Nie,Tzion Fahima,Vladimir Glikson,Dina Raats,Helena Toegelová,Jan Vrána,Benoît Darrier,Delfina Barabaschi,Pilar Hernández,Sergio Gálvez,Hikmet Budak,Jonathan Jones,Kamil Witek,Guotai Yu,Ian Small,Joanna Melonek,Ruonan Zhou,Tatiana Belova,K. Kanyuka,Robert King,Kirby Nilsen,Sean Walkowiak,Richard Cuthbert,R. Knox,Krysta Wiebe,Daoquan Xiang,Antje Rohde,T. Golds,Jana Čížková,Bala Akpınar,Sezgi Biyiklioglu,Liangliang Gao,Amidou N’Diaye,Lise Pingault,Jan Šafář,Anne‐Françoise Adam‐Blondon,Raphaël Flores,Claire Guerche,Mikaël Loaec,Janet Condie,Jennifer Ens,Ron MacLachlan,Yifang Tan,Adriana Alberti,Claude Rispe,Valérie Barbe,Arnaud Couloux,Corinne Cruaud,Karine Labadie,Sophie Mangenot,Jacqueline Batley,Gaganpreet Kaur,Ming‐Cheng Luo,Sunish Sehgal,Parveen Chhuneja,Om Gupta,Suruchi Jindal,Parampreet Kaur,Palvi Malik,Priti Sharma,Bharat Yadav,Nisha Singh,Jitendra Khurana,Chanderkant Chaudhary,Naveen Sharma,Vinod Kumar,Ajay Mahato,Sombir Rao,Amitha Sevanthi,R. Tomar,Kateřina Holušová,Ondřej Plíhal,Matthew Clark,Darren Heavens,George Kettleborough,Jonathan Wright,Yuqin Hu,Е. Салина,Nikolai Ravin,K. Skryabin,Alexey Beletsky,Vitaly Kadnikov,Andrey Mardanov,M. Nesterov,Andrey Rakitin,E. Sergeeva,Hirokazu Handa,Hajime Kanamori,Satoshi Katagiri,Fuminori Kobayashi,Shuhei Nasuda,Tsuyoshi Tanaka,Jianzhong Wu,Federica Cattonaro,Min Jiumeng,Karl Kugler,Matthias Pfeifer,Simen Sandve,Xun Xu,Bujie Zhan,Philipp Bayer,David Edwards,Satomi Hayashi,Zuzana Tulpová,Paul Visendi,Licao Cui,Xianghong Du,Kewei Feng,Wei Tong,Li Wang,Françoise Alfama-Depauw,Michael Spannagl
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,Stéphanie Pateyron
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Aug 17, 2018
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Abstract

Insights from the annotated wheat genome Wheat is one of the major sources of food for much of the world. However, because bread wheat's genome is a large hybrid mix of three separate subgenomes, it has been difficult to produce a high-quality reference sequence. Using recent advances in sequencing, the International Wheat Genome Sequencing Consortium presents an annotated reference genome with a detailed analysis of gene content among subgenomes and the structural organization for all the chromosomes. Examples of quantitative trait mapping and CRISPR-based genome modification show the potential for using this genome in agricultural research and breeding. Ramírez-González et al. exploited the fruits of this endeavor to identify tissue-specific biased gene expression and coexpression networks during development and exposure to stress. These resources will accelerate our understanding of the genetic basis of bread wheat. Science , this issue p. eaar7191 ; see also p. eaar6089

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